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--- public:ba-themen [2025/10/22 06:21] – spohr
+++ public:ba-themen [2026/05/17 17:05] (current) – schulte
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   * Integrate/Implement CP ILP Formulations as a stand-alone application that processes MIDI or as a plugin for the scorewrite software MuseScore (Tanaka) Contact: Philipp
   * Paper Dominik Heider https://www.sciencedirect.com/science/article/pii/S0010482524002695 do that with LOBICO (categorical classification, not binary)
-  * https://www.sciencedirect.com/science/article/abs/pii/S0305054825000589 Implementierung eines "verbesserten" Algorithmus für Maximium Diversity, evtl. mit der 3-Phase-Search verknüpfbar. Contact: Khoa
+  * Changing the calculation of a drug response metric for a pharmacodynamic dose-time-response model. Contact: Khoa
+  * Removing tautomers and mesomers in generated chemical structures. Contact: Khoa
+  * Clustering of tumor trees with POTTR / based on POTTR. Contact: Sara
+  * Find maximal common trajectories in conflict graph using heuristics for max independent set. Contact: Sara
+  * Build phylogenetic trees from pancreas WES data and apply POTTR for different groups / apply a clustering algorithm (oncotree2vec?, Tamilas work?) -> are sample types clustered together? Contact: Sara
 === MSc level ===